BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A06SP1|AL427556
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1367 1697 0.0
>3x_Contig1367
Length = 7312
Score = 1697 bits (843), Expect = 0.0
Identities = 903/935 (96%), Gaps = 1/935 (0%)
Strand = Plus / Plus
Query: 1 gcatagaaycaccacttgaaaaaagtaacggtaatagtgctggtaacatatagaccacat 60
|||| ||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||
Sbjct: 2461 gcatcgaaccaccacttgcaacaagtaacggtaatagtgctggtaacat-tagaccacat 2519
Query: 61 aaggatgagaagaagcggtggtcctttatttcaactaatagttccagtaaaaaaaggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2520 aaggatgagaagaagcggtggtcctttatttcaactaatagttccagtaaaaaaaggtgg 2579
Query: 121 tctactttatmatttgttagcgataaaaaatmaaamaaacggttathcgttgttagcacc 180
|||||||||| |||||||||||||| ||||| ||| |||||||||| |||||||||||||
Sbjct: 2580 tctactttatcatttgttagcgatacaaaatcaaacaaacggttatccgttgttagcacc 2639
Query: 181 gaatcttcttcgaaaaggtccagtgtacagtwactgagcaaacaatcttcaamaaamaaa 240
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||
Sbjct: 2640 gaatcttcttcgaaaaggtccagtgtacagtcactgagcaaacaatcttcaacaaacaaa 2699
Query: 241 ttaaaamgatccagcaccggtgcgtaactgaratyaatgtttaamaagatagcgttgaaa 300
|||||| |||||||||||||||||| ||||| || ||||||||| |||||||||||||||
Sbjct: 2700 ttaaaacgatccagcaccggtgcgtcactgagatcaatgtttaacaagatagcgttgaaa 2759
Query: 301 gatgaggataaagaaaattcaggggtkatgttggctcataagagaggacaatccacaacg 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2760 gatgaggataaagaaaattcaggggtcatgttggctcataagagaggacaatccacaacg 2819
Query: 361 ttggctagttcttttactgtttctgctaaggcacaacccactccttctgctaggattcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2820 ttggctagttcttttactgtttctgctaaggcacaacccactccttctgctaggattcca 2879
Query: 421 ttaaaaccaattaatmagaacaamaaacgcgaacaaagatttagcacaataccaatgtta 480
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 2880 ttaaaaccaattaatcagaacaacaaacgcgaacaaagatttagcacaataccaatgtca 2939
Query: 481 ccatctatggataacatgagtatgttttcgcaacaaagtaactmatctatgggtactagg 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2940 ccatctatggataacatgagtatgttttcgcaacaaagtaactcatctatgggtactagg 2999
Query: 541 tggaagttttggaaaagaaaacaggattgctcacaggatttccgtttcatgcaagattcc 600
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||
Sbjct: 3000 tggaagttttggaaaagaaaacaggattgcccacaggattcccgtttcatgcaagactcc 3059
Query: 601 aatatatyaatgcgtaacaaatcatctctttcagatcttagaaaatcgatcttccaaaac 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3060 aatatatcaatgcgtaacaaatcatctctttcagatcttagaaaatcgatcttccaaaac 3119
Query: 661 tctatgatgggccaatcagagcbaactcaasatttgaaatcaagaagatcacattcttct 720
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 3120 tctatgatgggccaatcagagccaactcaagatttgaaatcaagaagatcacattcttct 3179
Query: 721 ttscagcacaaaagctcgcattcttctttgaagcagaaaagttcgcatccatctttgaag 780
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3180 ttgcagcacaaaagctcgcattcttctttgaagcagaaaagttcgcatccatctttgaag 3239
Query: 781 aaattgcatagcasaagaaattccagtatagcatccaacgattcgtcggccccacagatc 840
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3240 aaattgcatagcagaagaaattccagtatagcatccaacgattcgtcggccccacagatc 3299
Query: 841 tcattgccaatccctgatcaagtttccagagataagattaggaccaaactaagamattca 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3300 tcattgccaatccctgatcaagtttccagagataagattaggaccaaactaagacattca 3359
Query: 901 agctccttgatctctatcaatagtaatatattggg 935
|||||||||||||||||||||||||||||||||||
Sbjct: 3360 agctccttgatctctatcaatagtaatatattggg 3394
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6331
Number of Sequences: 1807
Number of extensions: 6331
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.2 bits)